barcode-constrained-phylogeny

This directory is intended for data resources that are imported by the pipeline while it runs. These data are used as reference materials and consist of a data dump from BOLD (with sequences), a release from OpenTree (for topological constraints), and precomputed hidden Markov models for selected barcode markers.

The file bold_ids.tsv is a mapping between the taxonomic names connected to BOLD process IDs and taxa from the Netherlands Species Registry. This file was produced by: